CGNS: error checking file type
Posted: Fri Apr 12, 2024 2:32 am
Hi,
I am following the "full domain" tutorial. More specifically, the first case. When I arrive at the computation stage. I get the following error displayed :
Inspecting the logs, I see this :
Any idea on how to solve this problem? I haven't seen anything related to this issue on this forum. The other two meshes in .med file type are preprocessing correctly. Only vessel.cgns seems to cause the issue.
If it can be of any information, I did the simple junction tutorial without any problems.
Thank you in advance,
Michael
I am following the "full domain" tutorial. More specifically, the first case. When I arrive at the computation stage. I get the following error displayed :
Code: Select all
code_saturne
============
Version: 7.0.6-patch
Path: /home/fuxin/Code_Saturne/7.0.6-patch/code_saturne-7.0.6-patch/arch/Linux_x86_64
Result directory:
/home/fuxin/Desktop/Code_Saturne_Tutorials/full_domain/case1/RESU/20240412-0235
Copying base setup data
-----------------------
Compiling and linking user-defined functions
--------------------------------------------
Preparing calculation data
--------------------------
Single processor code_saturne simulation.
Preprocessing calculation
-------------------------
Post-calculation operations
---------------------------
Error running the preprocessor.
Check the preprocessor.log file for details.
Error in preprocessing stage.
Error in preprocessing stage.
Code: Select all
/home/fuxin/Code_Saturne/7.0.6-patch/code_saturne-7.0.6-patch/arch/Linux_x86_64/libexec/code_saturne/cs_preprocess
--out mesh_input/mesh_03.csm --log preprocessor_03.log --case preprocessor_03
/home/fuxin/Desktop/Code_Saturne_Tutorials/full_domain/MESH/vessel.cgns
.------------------------------.
| |
| Code_Saturne Preprocessor |
| |
`------------------------------'
code_saturne version 7.0.6-patch (built Thu Jan 11 18:43:35 2024)
CGNS 4.1.0 file format support
MED 4.1.1 (HDF5 1.10.6) file format support
Reading of compressed files ('.gz') with Zlib 1.2.11
Case configuration
------------------
Date : Fri Apr 12 02:35:31 2024
System : Linux 5.15.0-102-generic
Machine : fuxin
Processor : AMD Ryzen 7 5800X 8-Core Processor
Memory : 16275496
User : fuxin (fuxin)
Directory : /home/fuxin/Desktop/Code_Saturne_Tutorials/full_domain/case1/RESU/20240412-0235
Case name : preprocessor_03
Mesh file : /home/fuxin/Desktop/Code_Saturne_Tutorials/full_domain/MESH/vessel.cgns
Reading mesh from file in CGNS format
----------------------
Mesh file: /home/fuxin/Desktop/Code_Saturne_Tutorials/full_domain/MESH/vessel.cgns
Error in preprocessor execution
===============================
/home/fuxin/Documents/saturne-src/code_saturne/preprocessor/pre-post/ecs_pre_cgns.c:250: Fatal error.
CGNS: error checking file type "/home/fuxin/Desktop/Code_Saturne_Tutorials/full_domain/MESH/vessel.cgns":
no CGNS error reported
Call stack
1: 0x563e1a52017f <ecs_pre_cgns__lit_maillage+0x41af> (cs_preprocess)
2: 0x563e1a5175b3 <ecs_pre__lit_maillage+0x103> (cs_preprocess)
3: 0x563e1a50f390 <main+0xa0> (cs_preprocess)
4: 0x7fdb647b3083 <__libc_start_main+0xf3> (libc.so.6)
5: 0x563e1a50fbde <_start+0x2e> (cs_preprocess)
End of stack
If it can be of any information, I did the simple junction tutorial without any problems.
Thank you in advance,
Michael